BiC2PAM: constraint-guided biclustering for biological data analysis with domain knowledge

نویسندگان
چکیده

برای دانلود رایگان متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید

اگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید

منابع مشابه

Knowledge guided analysis of microarray data q

To microarray expression data analysis, it is well accepted that biological knowledge-guided clustering techniques show more advantages than pure mathematical techniques. In this paper, Gene Ontology is introduced to guide the clustering process, and thus a new algorithm capturing both expression pattern similarities and biological function similarities is developed. Our algorithm was validated...

متن کامل

Biclustering with Background Knowledge using Formal Concept Analysis

Biclustering methods have proven to be critical tools in the exploratory analysis of high-dimensional data including information networks, microarray experiments, and bag of words data. However, most biclustering methods fail to answer specific questions of interest and do not incorporate background knowledge and expertise from the user. To this end, query-based biclustering algorithms have bee...

متن کامل

Large Scale Experiments Data Analysis for Estimation of Hydrodynamic Force Coefficients Part 1: Time Domain Analysis

This paper describes various time-domain methods useful for analyzing the experimental data obtained from a circular cylinder force in terms of both wave and current for estimation of the drag and inertia coefficients applicable to the Morison’s equation. An additional approach, weighted least squares method is also introduced. A set of data obtained from experiments on heavily roughened circul...

متن کامل

Formal Concept Analysis for Knowledge Discovery from Biological Data

Due to rapid advancement in high-throughput techniques, such as microarrays and next generation sequencing technologies, biological data are increasing exponentially. The current challenge in computational biology and bioinformatics research is how to analyze these huge raw biological data to extract biologically meaningful knowledge. This chapter presents the applications of formal concept ana...

متن کامل

Constraint Based Methods for Biological Sequence Analysis

The need for processing biological information is rapidly growing, owing to the masses of new information in digital form being produced at this time. Old methodologies for processing it can no longer keep up with this rate of growth. The methods of Artificial Intelligence (AI) in general and of language processing in particular can offer much towards solving this problem. However, interdiscipl...

متن کامل

ذخیره در منابع من


  با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید

ژورنال

عنوان ژورنال: Algorithms for Molecular Biology

سال: 2016

ISSN: 1748-7188

DOI: 10.1186/s13015-016-0085-5